RNA transcripts are complementary to which strand of DNA?
a) The coding strand
b) The complementary strand
c) The protein strand
d) The template strand
D is correct. The template strand. During transcription, DNA gets unwound by RNA polymerase to form a template strand and a coding strand. RNA polymerase binds to the template strand and, using nucleotides, creates a complementary RNA sequence. Therefore, RNA is complementary to the template strand and has the same sequence as the coding strand with uracil in place of thymine.
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Transcription is the biological synthesis of RNA using DNA as a template. Central to this process is the enzyme RNA polymerase, which performs all of the functions of transcription. DNA replication, by contrast, involves several enzymes. So transcription is, in fact, a much more straightforward process than DNA replication.
Transcription begins when RNA polymerase binds to the promoter. The promoter is a specific sequence of DNA that can be thought of as the transcription start site. In order for DNA to be transcribed into RNA and in order to express a particular gene, RNA polymerase must first bind to the promoter region of that gene.
Once RNA polymerase binds to the promoter region on DNA, it will begin to unwind the DNA. This process occurs because RNA polymerase will use DNA as a template to create RNA. So, in addition to having polymerase activity, RNA polymerase has helicase activity as well. The primary function of helicase enzymes is to unpack, unwind, or unzip genetic material. Once DNA is unwound, two separate strands will be formed. One strand of DNA is called the template strand, and the other strand is called the coding strand.
Once the DNA strands are separated, RNA polymerase binds to the template strand and, using it, creates a new RNA sequence, as shown in Figure 1 below. This new RNA sequence is complementary to the template DNA strand and has the same sequence as the coding strand, except that RNA contains the nucleotide uracil in the place of DNA’s thymine.
RNA polymerase will continue to synthesize the new RNA transcript until it reaches a transcription stop site. At this point, it will stop transcribing the DNA. So unlike DNA replication, where the entire chromosome/genome gets replicated, transcription only reproduces a fraction of the genetic information found on the relevant chromosome. And which part gets transcribed depends on the needs of the cell and its regulatory mechanisms.
As a final point, note that RNA polymerase, unlike DNA polymerase, does not have proofreading activity. This means that not every RNA transcript will perfectly match its DNA coding strand counterpart. If an erroneous RNA transcript is then translated, the resulting protein product may be non-functional, depending on the significance of the errors.
The reason RNA polymerase does not have proofreading activity is not fully understood, but one reason may be because RNA is not as stable as DNA. After RNA is made, it can be degraded relatively quickly. However, DNA is meant to stick around for the entire duration of an organism’s lifespan. Since this is the case, DNA must remain error-free. However, if a mistake is made when transcribing RNA, it may not have as severe an effect because of its short lifespan. After it is degraded, a brand-new, error-free RNA molecule can be created.
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